Kashyap, Vipul

Abstract: The Semantic Network, a component of the Unified Medical Language System (UMLS), describes core biomedical knowledge consisting of semantic types and relationships. It is a well established, semi-formal ontology in widespread use for over a decade. We expected to publish this ontology on the Semantic Web, using OWL, with relatively little effort. However, we ran into a number of problems concerning alternative interpretations of the SN notation and the inability to express some of the interpretations in OWL. We detail these problems, as a cautionary tale to others planning to publish pre-existing ontologies on the Semantic Web, as a list of issues to consider when describing formally concepts in any ontology, and as a collection of criteria for evaluating alternative representations, which could form part of a methodology of ontology development.

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